Dehalococcoidetes
Encyclopedia
"Dehalococcoides" is a class of "Chloroflexi
", a phylum
of Bacteria
. It is also known as the DHC group.
The name "Dehalococcoidetes" is a placeholder name given by Hugenholtz and Stackebrandt, 2004, after "Dehalococcoides ethenogenes" a partially described
species
in 1997, whereas the first species fully described belonging to this class was Dehalogenimonas lykanthroporepellens by Moe et al. 2009, but no emendations to the name were made.
(coccoid) bacteria capable capable of dehalogenating polychlorinated aliphatic alkanes, such as tetrachloroethane, trichloropropane and trichloroethane, dichloropropane and dichloroethane.
One of the features of the members of the phylum Chloroflexi
is the unusual cell wall structure
, which is monoderm but with great variation in presence or structure of the peptidoglycan
resulting in many members staining Gram-negative
and other Gram-positive
.
Both species of Dehalococcoidetes stain Gram negative, but they potentially lack peptidoglycan and instead possess pseudopeptidoglycan (S-layer) (resistant to peptidoglycan-attacking antibiotics ampicillin
and vancomycin
, wheat germ agglutinin
does not bind nor does lysozyme
work)
Chloroflexi (phylum)
The Chloroflexi or Chlorobacteria are a phylum of bacteria containing isolates with a diversity of phenotypes including members that are aerobic thermophiles, which use oxygen and grow well in high temperatures, anoxygenic phototrophs, which use light for photosynthesis, and anaerobic...
", a phylum
Phylum
In biology, a phylum The term was coined by Georges Cuvier from Greek φῦλον phylon, "race, stock," related to φυλή phyle, "tribe, clan." is a taxonomic rank below kingdom and above class. "Phylum" is equivalent to the botanical term division....
of Bacteria
Bacteria
Bacteria are a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals...
. It is also known as the DHC group.
The name "Dehalococcoidetes" is a placeholder name given by Hugenholtz and Stackebrandt, 2004, after "Dehalococcoides ethenogenes" a partially described
Bacterial taxonomy
Bacterial taxonomy is the taxonomy, i.e. the rank-based classification, of bacteria.In the scientific classification established by Carl von Linné, each species has to be assigned to a genus , which in turn is a lower level of a hierarchy of ranks .In the currently accepted classification...
species
Species
In biology, a species is one of the basic units of biological classification and a taxonomic rank. A species is often defined as a group of organisms capable of interbreeding and producing fertile offspring. While in many cases this definition is adequate, more precise or differing measures are...
in 1997, whereas the first species fully described belonging to this class was Dehalogenimonas lykanthroporepellens by Moe et al. 2009, but no emendations to the name were made.
Characteristics
Both species, "Dehalococcoides ethenogenes" and Dehalogenimonas lykanthroporepellens are irregular coccusCoccus
Coccus can be used to describe any bacterium that has a spherical shape. It is one of the three distinct types of bacteria shapes, the other two being bacillus and spirillum cells...
(coccoid) bacteria capable capable of dehalogenating polychlorinated aliphatic alkanes, such as tetrachloroethane, trichloropropane and trichloroethane, dichloropropane and dichloroethane.
One of the features of the members of the phylum Chloroflexi
Chloroflexi
Chloroflexi is one of four classes of bacteria in the phylum Chloroflexi, known as filamentous green non-sulfur bacteria. They produce energy from light and are named for their green pigment, usually found in photosynthetic bodies called chlorosomes....
is the unusual cell wall structure
Cell wall
The cell wall is the tough, usually flexible but sometimes fairly rigid layer that surrounds some types of cells. It is located outside the cell membrane and provides these cells with structural support and protection, and also acts as a filtering mechanism. A major function of the cell wall is to...
, which is monoderm but with great variation in presence or structure of the peptidoglycan
Peptidoglycan
Peptidoglycan, also known as murein, is a polymer consisting of sugars and amino acids that forms a mesh-like layer outside the plasma membrane of bacteria , forming the cell wall. The sugar component consists of alternating residues of β- linked N-acetylglucosamine and N-acetylmuramic acid...
resulting in many members staining Gram-negative
Gram-negative
Gram-negative bacteria are bacteria that do not retain crystal violet dye in the Gram staining protocol. In a Gram stain test, a counterstain is added after the crystal violet, coloring all Gram-negative bacteria with a red or pink color...
and other Gram-positive
Gram-positive
Gram-positive bacteria are those that are stained dark blue or violet by Gram staining. This is in contrast to Gram-negative bacteria, which cannot retain the crystal violet stain, instead taking up the counterstain and appearing red or pink...
.
Both species of Dehalococcoidetes stain Gram negative, but they potentially lack peptidoglycan and instead possess pseudopeptidoglycan (S-layer) (resistant to peptidoglycan-attacking antibiotics ampicillin
Ampicillin
Ampicillin is a beta-lactam antibiotic that has been used extensively to treat bacterial infections since 1961. Until the introduction of ampicillin by the British company Beecham, penicillin therapies had only been effective against Gram-positive organisms such as staphylococci and streptococci...
and vancomycin
Vancomycin
Vancomycin INN is a glycopeptide antibiotic used in the prophylaxis and treatment of infections caused by Gram-positive bacteria. It has traditionally been reserved as a drug of "last resort", used only after treatment with other antibiotics had failed, although the emergence of...
, wheat germ agglutinin
Wheat germ agglutinin
Wheat germ agglutinin or WGA is a lectin that protects wheat from insects, yeast and bacteria. An agglutinin protein, it binds to N-acetyl-D-glucosamine and Sialic acid. N-acetyl-D-glucosamine in the natural environment of wheat is found in the chitin of insects, and the cell membrane of yeast &...
does not bind nor does lysozyme
Lysozyme
Lysozyme, also known as muramidase or N-acetylmuramide glycanhydrolase, are glycoside hydrolases, enzymes that damage bacterial cell walls by catalyzing hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between...
work)