Species distribution
Encyclopedia
Species distribution is the manner in which a biological taxon
is spatially arranged. Species distribution is not to be confused with dispersal
, which is the movement of individuals away from their area of origin
or from centers of high population density. A similar concept is the species range. A species range is often represented with a species range map. Biogeographers try to understand the factors determining a species' distribution. The pattern of distribution is not permanent for each species. Distribution patterns can change seasonally, in response to the availability of resources, and also depending on the scale at which they are viewed. Dispersion usually takes place at the time of reproduction. Populations within a species are translocated through many methods, including dispersal by people, wind, water and animals. People are one of the largest distributors due to the current trends in globalization and the expanse of the transportation industry. For example, large tankers often fill their ballasts with water at one port and empty them in another, causing a wider distribution of aquatic species.
Biogeography
is the study of the distribution of biodiversity over space and time. It is very useful in understanding species distribution through factors such as speciation, extinction, continental drift, glaciation, variation of sea levels, river capture and available resources. This branch of study not only gives a description of the species distribution, but also a geographical explanation for the distribution of particular species. The traditional biogeographic regions were first modeled by Alfred Wallace in The Geographical Distribution of Animals (1876). These were based on the work of Sclater’s terrestrial biogeographic regions. Wallace’s system was based on both birds and vertebrates, including non-flying mammals, which better reflect the natural divisions of the Earth due to their limited dispersal abilities.
Other causes of clumped distributions are the inability of offspring to independently move from their habitat. This is seen in juvenile animals that are immobile and strongly dependent upon parental care. For example, the bald eagle
's nest of eaglets exhibits a clumped species distribution because all the offspring are in a small subset of a survey area before they learn to fly. Clumped distribution can be beneficial to the individuals in that group. However, in some herbivore cases, such as cows and wildebeests, the vegetation around them can suffer, especially if animals target one plane in particular.
Clumped distribution in species acts as a mechanism against predation as well as an efficient mechanism to trap or corner prey. African wild dogs, Lycaon pictus, use the technique of communal hunting to increase their success rate at catching prey. It has been shown that larger packs of African wild dogs tend to have a greater number of successful kills. A prime example of clumped distribution due to patchy resources is the wildlife in Africa during the dry season; lions, hyenas, giraffes, elephants, gazelles, and many more animals are clumped by small water sources that are present in the severe dry season. It has also been observed that extinct and threatened species are more likely to be clumped in their distribution on a phylogeny. The reasoning behind this is that they share traits that increase vulnerability to extinction because related taxa are often located within the same broad geographical or habitat types where human-induced threats are concentrated. Using recently developed complete phylogenies for mammalian carnivores and primates it has been shown that the majority of instances threatened species are far from randomly distributed among taxa and phylogenetic clade
s and display clumped distribution.
leucophylla
is a species in California that naturally grows in uniform spacing. This flower releases chemicals called terpenes which inhibit the growth of other plants around it and results in uniform distribution. This is an example of allelopathy
, which is the release of chemicals from plant parts by leaching, root exudation, volatilization, residue decomposition and other processes. Allelopathy can have beneficial, harmful, or neutral effects on surrounding organisms. Some allelochemicals even have selective affects on surrounding organisms; for example, the tree species Leucaena leucocephala exudes a chemical that inhibits the growth of other plants but not those of its own species, and thus can affect the distribution of specific rival species. Allelopathy usually results in uniform distributions, and its potential to suppress weeds is being researched. Farming and agricultural practices often create uniform distribution in areas where it would not previously exist, for example, orange trees growing in rows on a plantation.
are dispersed by wind, random distribution will often occur as the seedlings land in random places determined by uncontrollable factors. Tropical fig trees exhibit random distribution as well because of wind pollination. In addition to tropical fig trees and dandelion seeds, oyster larvae can travel hundreds of kilometers powered by sea currents, which causes random distribution when the larvae land in random places.
Although random is thought to be unpredictable, it is the only dispersion that has a mathematical equation to represent it. This is due to the individualistic characteristics of random dispersion based on the idea that every species has equal opportunity and access to resources.
Species distribution can now be potentially predicted based on pattern of biodiversity at spatial scales. A general hierarchical model can integrate disturbance, dispersal and population dynamics. Based on factors of dispersal, disturbance, resources limiting climate, and other species distribution, predictions of species distribution can create a bioclimate range, or bioclimate envelope. The envelope can range from a local to a global scale or a density independence to density dependence. The hierarchical model takes into consideration of requirements and impacts or resources as well as local extinctions in disturbance factors. Models can integrate the dispersal/migration model, the disturbance model, and abundance model. SDM's can be used to assess climate change impacts and conservation management issues. Species distribution models include, presence/absence models, the dispersal/migration models, disturbance models, and abundance models. A prevalent way of creating predicted distribution maps for different species is to reclassify a land cover layer depending on whether or not the species in question would be predicted to habit each cover type. This simple SDM is often modified through the use of range data or ancillary information- such as elevation or water distance.
Recent studies have indicated that the grid size used can have an effect on the output of these species distribution models. The standard 50x50 km grid size can select up to 2.89 times more area than when modeled with a 1x1 km grid for the same specie. This has several effects on the species conservation planning under climate change predictions (global climate models- which are frequently used in the creation of species distribution models- usually consists of 50–100 km size grids) which could lead to over-prediction of future ranges in species distribution modeling. This can result in the misidentification of protected areas intended for a specie’s future habitat.
factors are abiotic factors regarding soil, such as the coarseness of soil, local geology, soil pH, and aeration; and social factors include land use and water availability. An example of the effects of abiotic factors on species distribution can be seen in drier areas, where most individuals of a species will gather around water sources, forming a clumped distribution.
Biotic factors, such as predation, disease, and competition for resources such as food, water, and mates, can also affect how a species is distributed. A biotic factor is any behavior of an organism that affects another organism, such as a predator consuming its prey. For example, biotic factors in a quail’s environment would include their prey (insects and seeds), competition from other quail, and their predators, such as the coyote. An advantage of a herd, community, or other clumped distribution allows a population to detect predators earlier, at a greater distance, and potentially mount an effective defense. Due to limited resources, populations may be evenly distributed to minimize competition, as is found in forests, where competition for sunlight produces an even distribution of trees.
To utilize the Clark-Evans nearest neighbor method, researchers examine a population of a single species. The distance of an individual to its nearest neighbor is recorded for each individual in the sample. For two individual that are each other's nearest neighbor, the distance is recorded twice, once for each individual. To receive accurate results, it is suggested that the number of distance measurements is at least 50. The average distance between nearest neighbors is compared to the expected distance in the case of random distribution to give the ratio:
If this ratio (R) is equal to 1, then the population is randomly dispersed. If R is significantly greater than 1, the population is evenly dispersed. Lastly, if R is significantly less than 1, the population is clumped. Statistical tests (such as t-test, chi squared, etc.) can then be used to determine whether R is significantly different from 1.
The Variance/Mean ratio method focuses mainly on determining whether a species fits a randomly spaced distribution, but can also be used as evidence for either an even or clumped distribution. To utilize the Variance/Mean ratio method, data is collected from several random samples of a given population. In this analysis, it is imperative that data from at least 50 sample plots is considered. The number of individuals present in each sample is compared to the expected counts in the case of random distribution. The expected distribution can be found using Poisson distribution
. If the variance/mean ratio is equal to 1, the population is found to be randomly distributed. If it is significantly greater than 1, the population is found to be clumped distribution. Finally, if the ratio is significantly less than 1, the population is found to be evenly distributed. Typical statistical tests used to find the significance of the variance/mean ratio include Student's t-test
and chi squared.
However, many researchers believe that species distribution models based on statistical analysis, without including ecological models and theories, are too incomplete for prediction. Instead of conclusions based on presence-absence data, probabilities that convey the likelihood a species will occupy a given area are more preferred because these models include an estimate of confidence in the likelihood of the species being present/absent. Additionally, they are also more valuable than data collected based on simple presence or absence because models based on probability allow the formation of spatial maps that indicates how likely a species is to be found in a particular area. Similar areas can then be compared to see how likely it is that a species will occur there also; this leads to a relationship between habitat suitability and species occurrence.
Taxon
|thumb|270px|[[African elephants]] form a widely-accepted taxon, the [[genus]] LoxodontaA taxon is a group of organisms, which a taxonomist adjudges to be a unit. Usually a taxon is given a name and a rank, although neither is a requirement...
is spatially arranged. Species distribution is not to be confused with dispersal
Biological dispersal
Biological dispersal refers to species movement away from an existing population or away from the parent organism. Through simply moving from one habitat patch to another, the dispersal of an individual has consequences not only for individual fitness, but also for population dynamics, population...
, which is the movement of individuals away from their area of origin
Center of origin
The center of origin is a geographical area where a group of organisms, either domesticated or wild, first developed its distinctive properties. Centers of origin are also considered centers of diversity.-Plants:...
or from centers of high population density. A similar concept is the species range. A species range is often represented with a species range map. Biogeographers try to understand the factors determining a species' distribution. The pattern of distribution is not permanent for each species. Distribution patterns can change seasonally, in response to the availability of resources, and also depending on the scale at which they are viewed. Dispersion usually takes place at the time of reproduction. Populations within a species are translocated through many methods, including dispersal by people, wind, water and animals. People are one of the largest distributors due to the current trends in globalization and the expanse of the transportation industry. For example, large tankers often fill their ballasts with water at one port and empty them in another, causing a wider distribution of aquatic species.
Biogeography
Biogeography is the study of the distribution of species , organisms, and ecosystems in space and through geological time. Organisms and biological communities vary in a highly regular fashion along geographic gradients of latitude, elevation, isolation and habitat area...
is the study of the distribution of biodiversity over space and time. It is very useful in understanding species distribution through factors such as speciation, extinction, continental drift, glaciation, variation of sea levels, river capture and available resources. This branch of study not only gives a description of the species distribution, but also a geographical explanation for the distribution of particular species. The traditional biogeographic regions were first modeled by Alfred Wallace in The Geographical Distribution of Animals (1876). These were based on the work of Sclater’s terrestrial biogeographic regions. Wallace’s system was based on both birds and vertebrates, including non-flying mammals, which better reflect the natural divisions of the Earth due to their limited dispersal abilities.
Clumped distribution
Clumped distribution is the most common type of dispersion found in nature. In clumped distribution, the distance between neighboring individuals is minimized. This type of distribution is found in environments that are characterized by patchy resources. Clumped distribution is the most common type of dispersion found in nature because animals need certain resources to survive, and when these resources become rare during certain parts of the year animals tend to “clump” together around these crucial resources. Individuals might be clustered together in an area due to social factors such as selfish herds and family groups. Organisms that usually serve as prey form clumped distributions in areas where they can hide and detect predators easily.Other causes of clumped distributions are the inability of offspring to independently move from their habitat. This is seen in juvenile animals that are immobile and strongly dependent upon parental care. For example, the bald eagle
Bald Eagle
The Bald Eagle is a bird of prey found in North America. It is the national bird and symbol of the United States of America. This sea eagle has two known sub-species and forms a species pair with the White-tailed Eagle...
's nest of eaglets exhibits a clumped species distribution because all the offspring are in a small subset of a survey area before they learn to fly. Clumped distribution can be beneficial to the individuals in that group. However, in some herbivore cases, such as cows and wildebeests, the vegetation around them can suffer, especially if animals target one plane in particular.
Clumped distribution in species acts as a mechanism against predation as well as an efficient mechanism to trap or corner prey. African wild dogs, Lycaon pictus, use the technique of communal hunting to increase their success rate at catching prey. It has been shown that larger packs of African wild dogs tend to have a greater number of successful kills. A prime example of clumped distribution due to patchy resources is the wildlife in Africa during the dry season; lions, hyenas, giraffes, elephants, gazelles, and many more animals are clumped by small water sources that are present in the severe dry season. It has also been observed that extinct and threatened species are more likely to be clumped in their distribution on a phylogeny. The reasoning behind this is that they share traits that increase vulnerability to extinction because related taxa are often located within the same broad geographical or habitat types where human-induced threats are concentrated. Using recently developed complete phylogenies for mammalian carnivores and primates it has been shown that the majority of instances threatened species are far from randomly distributed among taxa and phylogenetic clade
Clade
A clade is a group consisting of a species and all its descendants. In the terms of biological systematics, a clade is a single "branch" on the "tree of life". The idea that such a "natural group" of organisms should be grouped together and given a taxonomic name is central to biological...
s and display clumped distribution.
Regular or Uniform distribution
Less common than clumped distribution, uniform distribution, also known as even distribution, is evenly spaced. Uniform distributions are found in populations in which the distance between neighboring individuals is maximized. The need to maximize the space between individuals generally arises from competition for a resource such as moisture or nutrients, or as a result of direct social interactions between individuals within the population, such as territoriality. For example, penguins often exhibit uniform spacing by aggressively defending their territory among their neighbors. Plants also exhibit uniform distributions, like the creosote bushes in the southwestern region of the United States. SalviaSalvia
Salvia is the largest genus of plants in the mint family, Lamiaceae, with approximately 700-900 species of shrubs, herbaceous perennials, and annuals. It is one of several genera commonly referred to as sage. When used without modifiers, sage generally refers to Salvia officinalis ; however, it is...
leucophylla
Salvia leucophylla
Salvia leucophylla is an aromatic sage native to the southern coastal mountain ranges of California and Baja California.-Taxonomy:The plant's specific epithet, leucophylla, describes the light grayish leaves...
is a species in California that naturally grows in uniform spacing. This flower releases chemicals called terpenes which inhibit the growth of other plants around it and results in uniform distribution. This is an example of allelopathy
Allelopathy
Allelopathy is a biological phenomenon by which an organism produces one or more biochemicals that influence the growth, survival, and reproduction of other organisms. These biochemicals are known as allelochemicals and can have beneficial or detrimental effects on the target organisms...
, which is the release of chemicals from plant parts by leaching, root exudation, volatilization, residue decomposition and other processes. Allelopathy can have beneficial, harmful, or neutral effects on surrounding organisms. Some allelochemicals even have selective affects on surrounding organisms; for example, the tree species Leucaena leucocephala exudes a chemical that inhibits the growth of other plants but not those of its own species, and thus can affect the distribution of specific rival species. Allelopathy usually results in uniform distributions, and its potential to suppress weeds is being researched. Farming and agricultural practices often create uniform distribution in areas where it would not previously exist, for example, orange trees growing in rows on a plantation.
Random distribution
Random distribution, also known as unpredictable spacing, is the least common form of distribution in nature and occurs when the members of a given species are found in homogeneous environments in which the position of each individual is independent of the other individuals: they neither attract nor repel one another. Random distribution is rare in nature as biotic factors, such as the interactions with neighboring individuals, and abiotic factors, such as climate or soil conditions, generally cause organisms to be either clustered or spread apart. Random distribution usually occurs in habitats where environmental conditions and resources are consistent. This pattern of dispersion is characterized by the lack of any strong social interactions between species. For example; When dandelion seedsSEEDS
SEEDS is a voluntary organisation registered under the Societies Act of India....
are dispersed by wind, random distribution will often occur as the seedlings land in random places determined by uncontrollable factors. Tropical fig trees exhibit random distribution as well because of wind pollination. In addition to tropical fig trees and dandelion seeds, oyster larvae can travel hundreds of kilometers powered by sea currents, which causes random distribution when the larvae land in random places.
Although random is thought to be unpredictable, it is the only dispersion that has a mathematical equation to represent it. This is due to the individualistic characteristics of random dispersion based on the idea that every species has equal opportunity and access to resources.
Species Distribution Model
See also Environmental niche modellingEnvironmental niche modelling
Environmental niche modelling, alternatively known as species distribution modelling, niche modelling, and climate envelope modelling refers to the process of using computer algorithms to predict the distribution of species in geographic space on the basis of a mathematical representation of their...
Species distribution can now be potentially predicted based on pattern of biodiversity at spatial scales. A general hierarchical model can integrate disturbance, dispersal and population dynamics. Based on factors of dispersal, disturbance, resources limiting climate, and other species distribution, predictions of species distribution can create a bioclimate range, or bioclimate envelope. The envelope can range from a local to a global scale or a density independence to density dependence. The hierarchical model takes into consideration of requirements and impacts or resources as well as local extinctions in disturbance factors. Models can integrate the dispersal/migration model, the disturbance model, and abundance model. SDM's can be used to assess climate change impacts and conservation management issues. Species distribution models include, presence/absence models, the dispersal/migration models, disturbance models, and abundance models. A prevalent way of creating predicted distribution maps for different species is to reclassify a land cover layer depending on whether or not the species in question would be predicted to habit each cover type. This simple SDM is often modified through the use of range data or ancillary information- such as elevation or water distance.
Recent studies have indicated that the grid size used can have an effect on the output of these species distribution models. The standard 50x50 km grid size can select up to 2.89 times more area than when modeled with a 1x1 km grid for the same specie. This has several effects on the species conservation planning under climate change predictions (global climate models- which are frequently used in the creation of species distribution models- usually consists of 50–100 km size grids) which could lead to over-prediction of future ranges in species distribution modeling. This can result in the misidentification of protected areas intended for a specie’s future habitat.
Abiotic and Biotic factors
The distribution of species into clumped, uniform, or random depends on different abiotic and biotic factors. Any non-living chemical or physical factor in the environment is considered an abiotic factor. There are three main types of abiotic factors: climatic factors consist of sunlight, atmosphere, humidity, temperature, and salinity; edaphicEdaphic
Edaphic is a nature related to soil. Edaphic qualities may characterize the soil itself, including drainage, texture, or chemical properties such as pH. Edaphic may also characterize organisms, such as plant communities, where it specifies their relationships with soil...
factors are abiotic factors regarding soil, such as the coarseness of soil, local geology, soil pH, and aeration; and social factors include land use and water availability. An example of the effects of abiotic factors on species distribution can be seen in drier areas, where most individuals of a species will gather around water sources, forming a clumped distribution.
Biotic factors, such as predation, disease, and competition for resources such as food, water, and mates, can also affect how a species is distributed. A biotic factor is any behavior of an organism that affects another organism, such as a predator consuming its prey. For example, biotic factors in a quail’s environment would include their prey (insects and seeds), competition from other quail, and their predators, such as the coyote. An advantage of a herd, community, or other clumped distribution allows a population to detect predators earlier, at a greater distance, and potentially mount an effective defense. Due to limited resources, populations may be evenly distributed to minimize competition, as is found in forests, where competition for sunlight produces an even distribution of trees.
Species Distribution Grids Project
The Species Distribution Grids Project is an effort led out of the University of Columbia to create maps and databases of the whereabouts of various animal species. This work is centered on preventing deforestation and prioritizing areas based on species richness. As of April 2009, data are available for global amphibian distributions, as well as birds and mammals in the Americas. The map gallery http://sedac.ciesin.columbia.edu/species/map_gallery.jsp contains sample maps for the Species Grids data set. These maps are not inclusive but rather contain a representative sample of the types of data available for download:Statistical determination of distribution patterns
There are various ways to determine the distribution pattern of species. The Clark-Evans nearest neighbor method can be used to determine if a distribution is clumped, uniform or random.To utilize the Clark-Evans nearest neighbor method, researchers examine a population of a single species. The distance of an individual to its nearest neighbor is recorded for each individual in the sample. For two individual that are each other's nearest neighbor, the distance is recorded twice, once for each individual. To receive accurate results, it is suggested that the number of distance measurements is at least 50. The average distance between nearest neighbors is compared to the expected distance in the case of random distribution to give the ratio:
If this ratio (R) is equal to 1, then the population is randomly dispersed. If R is significantly greater than 1, the population is evenly dispersed. Lastly, if R is significantly less than 1, the population is clumped. Statistical tests (such as t-test, chi squared, etc.) can then be used to determine whether R is significantly different from 1.
The Variance/Mean ratio method focuses mainly on determining whether a species fits a randomly spaced distribution, but can also be used as evidence for either an even or clumped distribution. To utilize the Variance/Mean ratio method, data is collected from several random samples of a given population. In this analysis, it is imperative that data from at least 50 sample plots is considered. The number of individuals present in each sample is compared to the expected counts in the case of random distribution. The expected distribution can be found using Poisson distribution
Poisson distribution
In probability theory and statistics, the Poisson distribution is a discrete probability distribution that expresses the probability of a given number of events occurring in a fixed interval of time and/or space if these events occur with a known average rate and independently of the time since...
. If the variance/mean ratio is equal to 1, the population is found to be randomly distributed. If it is significantly greater than 1, the population is found to be clumped distribution. Finally, if the ratio is significantly less than 1, the population is found to be evenly distributed. Typical statistical tests used to find the significance of the variance/mean ratio include Student's t-test
Student's t-test
A t-test is any statistical hypothesis test in which the test statistic follows a Student's t distribution if the null hypothesis is supported. It is most commonly applied when the test statistic would follow a normal distribution if the value of a scaling term in the test statistic were known...
and chi squared.
However, many researchers believe that species distribution models based on statistical analysis, without including ecological models and theories, are too incomplete for prediction. Instead of conclusions based on presence-absence data, probabilities that convey the likelihood a species will occupy a given area are more preferred because these models include an estimate of confidence in the likelihood of the species being present/absent. Additionally, they are also more valuable than data collected based on simple presence or absence because models based on probability allow the formation of spatial maps that indicates how likely a species is to be found in a particular area. Similar areas can then be compared to see how likely it is that a species will occur there also; this leads to a relationship between habitat suitability and species occurrence.
Global Warming Effects
Researchers from the Arctic Ocean Diversity (Arcod) project have documented rising numbers of warm-water crustaceans in the seas around Norway's Svalbard Islands. Arcod is part of the Census of Marine Life, a huge 10-year project involving researchers in more than 80 nations that aims to chart the diversity, distribution and abundance of life in the oceans. Marine Life has become largely affected by increasing effects of global warming. This study shows that as the ocean temperatures rise species are beginning to travel into the cold and harsh Arctic waters. Even the Snow Crab has extended its range 500 km north.External links
- http://www.cnr.uidaho.edu/range556/Appl_BEHAVE/projects/livestock_distribution.html
- http://www-stat.stanford.edu/~susan/courses/s116/node31.html