Transmissible gastroenteritis coronavirus
Encyclopedia
Transmissible Gastroenteritis Coronavirus (TGEV) is a species of animal virus
belonging to the family Coronaviridae
. TGEV are enveloped viruses with a positive-sense single-stranded RNA
genome
and a helical symmetry. The genomic size of coronaviruses ranges from approximately 28.6 kilobases.
Proteins that contribute to the overall structure of TGEV includes the spike (S), envelope (E), membrane (M) and nucleocapsid (N). TGEV is a group I coronavirus. Other group 1 coronaviruses include Canine coronavirus
, Feline coronavirus
, Human coronavirus 229E, and Porcine epidemic diarrhea virus.
The 3' segment of about 8000 nucleotides encodes subgenomic RNAs. The remaining part of the genome encodes viral replicase. The three largest gene sequence from 5' to 3' is in the order of E2 to E1 to N. There are about seven other open reading frames that are not structurally related. There are very little overlaps among the genes, and is densely packed. A negative strand is synthesized to serve as a template for transcribing RNAs of one genome size and several subgenome sized RNAs.
The E2 protein forms a petal-shaped 20 nm long projection from the virus's surface. The E2 protein is thought to be involved in pathogenesis by helping the virus enter the host cytoplasm. The E2 protein initially has 1447residues, and then a short hydrophobic sequence is cleaved. After glycosylation of the protein in the golgi, the protein is then incorporated into the new virus. There are several functional domains within the E2 protein. A 20 residue hydrophobic segment at the C-terminus anchors the protein in the lipid membrane. The rest of the protein is divided into two parts, a hydrophilic stretch that is inside the virus and a cysteine rich stretch that are possibly fatty acylation sites. The E1 protein is mostly embedded in the lipid envelop and hence plays an essential role in virus architecture. The E1 protein is postulated to interact with the lymphocyte membrane, which leads to the induction of IFN-coding genes.
Virus
A virus is a small infectious agent that can replicate only inside the living cells of organisms. Viruses infect all types of organisms, from animals and plants to bacteria and archaea...
belonging to the family Coronaviridae
Coronaviridae
Coronaviruses are enveloped, single-stranded, positive-sense RNA viruses with club-shaped surface about 120-160 nm in diameter that resemble a “corona”.-Virology:...
. TGEV are enveloped viruses with a positive-sense single-stranded RNA
RNA
Ribonucleic acid , or RNA, is one of the three major macromolecules that are essential for all known forms of life....
genome
Genome
In modern molecular biology and genetics, the genome is the entirety of an organism's hereditary information. It is encoded either in DNA or, for many types of virus, in RNA. The genome includes both the genes and the non-coding sequences of the DNA/RNA....
and a helical symmetry. The genomic size of coronaviruses ranges from approximately 28.6 kilobases.
Proteins that contribute to the overall structure of TGEV includes the spike (S), envelope (E), membrane (M) and nucleocapsid (N). TGEV is a group I coronavirus. Other group 1 coronaviruses include Canine coronavirus
Canine coronavirus
Canine coronavirus is a virus of the family Coronaviridae that causes a highly contagious intestinal disease worldwide in dogs. It was discovered in 1971 in Germany during an outbreak in sentry dogs.-Pathology:...
, Feline coronavirus
Feline infectious peritonitis
Feline infectious peritonitis is a fatal incurable disease that affects cats. It is believed by some to be caused by Feline Infectious Peritonitis Virus , which is a mutation of Feline Enteric Coronavirus - . Although there appears to be a connection between FIP and feline coronavirus, no clear...
, Human coronavirus 229E, and Porcine epidemic diarrhea virus.
TGEV Biology
TGEV belongs to the coronavirus family. It is an enveloped virus with a positive single stranded RNA genome. TGEV has three major structural proteins, which are phosphoprotein (N), integral membrane protein (E1), and large glycoprotein (E2). The N protein encapsulates the genomic RNA, and the S protein forms viral projections.The 3' segment of about 8000 nucleotides encodes subgenomic RNAs. The remaining part of the genome encodes viral replicase. The three largest gene sequence from 5' to 3' is in the order of E2 to E1 to N. There are about seven other open reading frames that are not structurally related. There are very little overlaps among the genes, and is densely packed. A negative strand is synthesized to serve as a template for transcribing RNAs of one genome size and several subgenome sized RNAs.
The E2 protein forms a petal-shaped 20 nm long projection from the virus's surface. The E2 protein is thought to be involved in pathogenesis by helping the virus enter the host cytoplasm. The E2 protein initially has 1447residues, and then a short hydrophobic sequence is cleaved. After glycosylation of the protein in the golgi, the protein is then incorporated into the new virus. There are several functional domains within the E2 protein. A 20 residue hydrophobic segment at the C-terminus anchors the protein in the lipid membrane. The rest of the protein is divided into two parts, a hydrophilic stretch that is inside the virus and a cysteine rich stretch that are possibly fatty acylation sites. The E1 protein is mostly embedded in the lipid envelop and hence plays an essential role in virus architecture. The E1 protein is postulated to interact with the lymphocyte membrane, which leads to the induction of IFN-coding genes.