USS Juniata has been the name of more than one United States Navy ship, and may refer to:
, a sloop of war in commission from 1862 to 1867, from 1869 to 1872, from 1873 to 1876, and from 1882 to 1889, a patrol vessel in commission from 1917 to 1918, a schooner in service from 1942 to 1945

See also

• USS LST-850, a tank landing ship in commission from 1944 to 1947, renamed in 1955 while in reserve