List of sequenced prokaryotic genomes
Encyclopedia
This list of sequenced eubacterial genomes contains all the eubacteria
Bacteria
Bacteria are a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria have a wide range of shapes, ranging from spheres to rods and spirals...

 known to have publicly-available complete genome sequences. Most of these sequences have been placed in the International Nucleotide Sequence Database Collaboration
International Nucleotide Sequence Database Collaboration
The International Nucleotide Sequence Database Collaboration consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves the following computerized databases: DNA Data Bank of Japan , GenBank and the EMBL...

, a public database which can be searched on the web
World Wide Web
The World Wide Web is a system of interlinked hypertext documents accessed via the Internet...

. A few of the listed genomes may not be in the INSDC database, but in other public databases.

Genomes listed as "Unpublished" are in a database, but not in the peer-reviewed
Peer review
Peer review is a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility...

 scientific literature.

For the genomes of archaea see list of sequenced archaeal genomes.
Sequenced Bacterial Genomes
Species Strain Type Base Pairs Genes Reference
Acidobacteria bacterium Ellin345 Acidobacteria
Acidobacteria
Acidobacteria are a newly devised phylum of Bacteria, whose members are physiologically diverse and ubiquitous, especially in soils, but are under-represented in culture....

5,650,368 4,777 Unpublished
Acinetobacter
Acinetobacter
Acinetobacter [asz−in−ée−toe–back−ter] is a genus of Gram-negative bacteria belonging to the Gammaproteobacteria. Acinetobacter species are non-motile and oxidase-negative, and occur in pairs under magnification....

 sp.
ADP1 Proteobacteria
Proteobacteria
The Proteobacteria are a major group of bacteria. They include a wide variety of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, and many other notable genera....

 Gammaproteobacteria
Gammaproteobacteria
Gammaproteobacteria is a class of several medically, ecologically and scientifically important groups of bacteria, such as the Enterobacteriaceae , Vibrionaceae and Pseudomonadaceae. An exceeding number of important pathogens belongs to this class, e.g...

3,598,621 3,325
Agrobacterium tumefaciens
Agrobacterium tumefaciens
Agrobacterium tumefaciens is the causal agent of crown gall disease in over 140 species of dicot. It is a rod shaped, Gram negative soil bacterium...

C58 Proteobacteria Alphaproteobacteria
Alphaproteobacteria
Alphaproteobacteria is a class of Proteobacteria. Like all Proteobacteria, they are Gram-negative.-Characteristics:The Alphaproteobacteria comprise most phototrophic genera, but also several genera metabolising C1-compounds , symbionts of plants and animals, and a group of pathogens, the...

2,841,581 2,722
Anabaena
Anabaena
Anabaena is a genus of filamentous cyanobacteria that exists as plankton. It is known for its nitrogen fixing abilities, and they form symbiotic relationships with certain plants, such as the mosquito fern. They are one of four genera of cyanobacteria that produce neurotoxins, which are harmful to...

 nostoc
PCC7120 Cyanobacteria Nostocales 6,413,771 5,368
Anabaena variabilis ATCC29413 Cyanobacteria Nostocales 6,365,727 5,039 Unpublished
Anaeromyxobacter dehalogenans 2CP-C Proteobacteria delta-epsilon 5,013,479 4,346 Unpublished
Anaplasma
Anaplasma
Anaplasma is a genus of rickettsiales bacteria.Anaplasmas reside in host red blood cells and lead to the disease anaplasmosis. The disease most commonly occurs in tropical areas of the world....

 marginale
StMaries Proteobacteria Alphaproteobacteria 1,197,687 949
Anaplasma phagocytophilum
Anaplasma phagocytophilum
Anaplasma phagocytophilum is a gram-negative bacterium that is unusual in its tropism to neutrophils...

HZ Proteobacteria Alphaproteobacteria 1,471,282 1,264
Aquifex aeolicus
Aquifex aeolicus
Aquifex aeolicus is a rod-shaped prokaryote with a length of 2 to 6 micrometers and a diameter of around half a micrometer. It is one of a handful of species in the Aquificae phylum, an unusual group of thermophilic bacteria that are thought to be some of the oldest species of bacteria.A...

VF5 Aquificae
Aquificae
The Aquificae phylum is a diverse collection of bacteria that live in harsh environmental settings. They have been found in hot springs, sulfur pools, and thermal ocean vents. Members of the genus Aquifex, for example, are productive in water between 85 to 95 °C. They are the dominant members of...

 Aquificae
1,551,335 1,522
Azoarcus sp. EbN1 Proteobacteria Betaproteobacteria
Betaproteobacteria
Betaproteobacteria is a class of Proteobacteria. Betaproteobacteria are, like all Proteobacteria, gram-negative.The Betaproteobacteria consist of several groups of aerobic or facultative bacteria which are often highly versatile in their degradation capacities, but also contain chemolithotrophic...

4,296,230 4,128
Bacillus anthracis
Bacillus anthracis
Bacillus anthracis is the pathogen of the Anthrax acute disease. It is a Gram-positive, spore-forming, rod-shaped bacterium, with a width of 1-1.2µm and a length of 3-5µm. It can be grown in an ordinary nutrient medium under aerobic or anaerobic conditions.It is one of few bacteria known to...

Ames Firmicutes
Firmicutes
The Firmicutes are a phylum of bacteria, most of which have Gram-positive cell wall structure. A few, however, such as Megasphaera, Pectinatus, Selenomonas and Zymophilus, have a porous pseudo-outer-membrane that causes them to stain Gram-negative...

 Bacilli
5,227,293 5,311
Bacillus anthracis Sterne Firmicutes Bacilli 5,228,663 5,287 Unpublished
Bacillus cereus
Bacillus cereus
Bacillus cereus is an endemic, soil-dwelling, Gram-positive, rod-shaped, beta hemolytic bacterium. Some strains are harmful to humans and cause foodborne illness, while other strains can be beneficial as probiotics for animals...

ATCC10987 Firmicutes Bacilli 5,224,283 5,603
Bacillus cereus ATCC14579 Firmicutes Bacilli 5,411,809 5,234
Bacillus cereus ZK Firmicutes Bacilli 5,300,915 5,134 Unpublished
Bacillus
Bacillus
Bacillus is a genus of Gram-positive, rod-shaped bacteria and a member of the division Firmicutes. Bacillus species can be obligate aerobes or facultative anaerobes, and test positive for the enzyme catalase. Ubiquitous in nature, Bacillus includes both free-living and pathogenic species...

 clausii
KSMK16 Firmicutes Bacilli 4,303,871 4,108
Bacillus halodurans C125 Firmicutes Bacilli 4,202,352 4,066
Bacillus licheniformis
Bacillus licheniformis
Bacillus licheniformis is a bacterium commonly found in the soil. It is found on bird feathers, especially chest and back plumage, and most often in ground-dwelling birds and aquatic species ....

ATCC14580 Firmicutes Bacilli 4,222,334 4,152
Bacillus licheniformis Unspecified Firmicutes Bacilli 4,222,645 4,196
Bacillus licheniformis DSM13 Firmicutes Bacilli 4,222,645 4,196
Bacillus subtilis
Bacillus subtilis
Bacillus subtilis, known also as the hay bacillus or grass bacillus, is a Gram-positive, catalase-positive bacterium commonly found in soil. A member of the genus Bacillus, B. subtilis is rod-shaped, and has the ability to form a tough, protective endospore, allowing the organism to tolerate...

168 Firmicutes Bacilli 4,214,630 4,106
Bacillus thuringiensis
Bacillus thuringiensis
Bacillus thuringiensis is a Gram-positive, soil-dwelling bacterium, commonly used as a biological pesticide; alternatively, the Cry toxin may be extracted and used as a pesticide. B...

9727 Firmicutes Bacilli 5,237,682 5,117 Unpublished
Bacteroides fragilis
Bacteroides fragilis
Bacteroides fragilis is a Gram-negative bacillus bacterium species, and an obligate anaerobe of the gut.B. fragilis group is the most commonly isolated bacteriodaceae in anaerobic infections especially those that originate from the gastrointestinal flora. B. fragilis is the most prevalent organism...

NCTC9343 Bacteroidetes
Bacteroidetes
The phylum Bacteroidetes is composed of three large classes of bacteria that are widely distributed in the environment, including in soil, in sediments, sea water and in the guts and on the skin of animals....

/Chlorobi Bacteroidetes
5,205,140 4,260
Bacteroides fragilis YCH46 Bacteroidetes/Chlorobi Bacteroidetes 5,277,274 4,578 Unpublished
Bacteroides
Bacteroides
Bacteroides is a genus of Gram-negative, bacillus bacteria. Bacteroides species are non-endospore-forming, anaerobes, and may be either motile or non-motile, depending on the species. The DNA base composition is 40-48% GC. Unusual in bacterial organisms, Bacteroides membranes contain sphingolipids...

 thetaiotaomicron
VPI5482 Bacteroidetes/Chlorobi Bacteroidetes 6,260,361 4,778
Bartonella henselae
Bartonella henselae
Bartonella henselae, formerly Rochalimæa, is a proteobacterium that can cause bacteremia, endocarditis, bacillary angiomatosis, and peliosis hepatis. It is also the causative agent of cat-scratch disease which, as the name suggests, occurs after a cat bite or scratch...

Houston-1 Proteobacteria Alphaproteobacteria 1,931,047 1,612
Bartonella quintana
Bartonella quintana
Bartonella quintana, originally known as Rochalimaea quintana, and "Rickettsia quintana", is a microorganism that is transmitted by the human body louse. This microorganism is the caustative agent of trench fever...

Toulouse Proteobacteria Alphaproteobacteria 1,581,384 1,308
Baumannia cicadellinicola Hc Proteobacteria Gammaproteobacteria 686,194 595 Unpublished
Bdellovibrio
Bdellovibrio
Bdellovibrio is a genus of Gram-negative, obligate aerobic bacteria.One of the more notable characteristics of this genus is that members parasitize other Gram-negative bacteria by entering into their periplasmic space and feeding on the biopolymers, e.g. proteins and nucleic acids, of their hosts...

 bacteriovorus
HD100 Proteobacteria delta-epsilon 3,782,950 3,583
Bifidobacterium longum
Bifidobacterium longum
Bifidobacterium longum is a species of Gram-positive anaerobic branched rod-shaped bacterium which can be found in the intestines of infant humans. They inhibit the growth of Gram-negative bacteria by producing lactic acid, and digest the complex sugars in human breast milk. Due to its importance,...

NCC2705 Acidobacteria 2,256,640 1,727
Blochmannia floridanus Strain Proteobacteria Gammaproteobacteria 705,557 589
Blochmannia pennsylvanicus bpEN Proteobacteria Gammaproteobacteria 791,654 610
Bordetella bronchiseptica
Bordetella bronchiseptica
Bordetella bronchiseptica is a small, gram-negative, rod-shaped bacterium of the genus Bordetella. It can cause infectious bronchitis, but rarely infects humans. Closely related to B. pertussis—the obligate human pathogen that causes pertussis or whooping cough—B...

RB50 Proteobacteria Betaproteobacteria 5,339,179 5,006 Unpublished
Bordetella parapertussis
Bordetella parapertussis
Bordetella parapertussis is a small Gram-negative bacterium of the genus Bordetella which is adapted to colonise the mammalian respiratory tract. Pertussis caused by B. parapertussis manifests with similar symptoms to B. pertussis-derived disease but tends to be generally less severe. Immunity...

12822 Proteobacteria Betaproteobacteria 4,773,551 4,402 Unpublished
Bordetella pertussis
Bordetella pertussis
Bordetella pertussis is a Gram-negative, aerobic coccobacillus of the genus Bordetella, and the causative agent of pertussis or whooping cough. Unlike B. bronchiseptica, B. pertussis is non-motile. Its virulence factors include pertussis toxin, filamentous hæmagglutinin, pertactin, fimbria, and...

TohamaI Proteobacteria Betaproteobacteria 4,086,189 3,806 Unpublished
Borrelia burgdorferi
Borrelia burgdorferi
Borrelia burgdorferi is a species of Gram negative bacteria of the spirochete class of the genus Borrelia. B. burgdorferi is predominant in North America, but also exists in Europe, and is the agent of Lyme disease....

B31 Spirochaetes 910,724 850
Borrelia garinii PBi Spirochaetes 904,246 832
Bradyrhizobium japonicum USDA110 Proteobacteria Alphaproteobacteria 9,105,828 8,317
Brucella abortus 2308 (chromosome I) Proteobacteria Alphaproteobacteria 1,156,948 1,164
2308 (chromosome II) Proteobacteria Alphaproteobacteria 2,121,359 2,186
Brucella abortus 9-941 (chromosome I) Proteobacteria Alphaproteobacteria 2,124,241 2,030
9-941 (chromosome II) Proteobacteria Alphaproteobacteria 1,162,204 1,055
Brucella melitensis
Brucella melitensis
-Introduction:Brucella melitensis is a gram negative coccobacillus bacteria from the Brucellaceae family. The bacterium causes Ovine Brucellosis, along with Brucella ovis. It can infect sheep, cattle, and sometimes humans and it can be transmitted by the stable fly...

16M (chromosome I) Proteobacteria Alphaproteobacteria 2,117,144 2,059
16M (chromosome II) Proteobacteria Alphaproteobacteria 1,177,787 1,139
Brucella suis 1330 (chromosome I) Proteobacteria Alphaproteobacteria 2,107,794 2,123
1330 (chromosome II) Proteobacteria Alphaproteobacteria 1,207,381 1,150
Buchnera
Buchnera
Buchnera can refer to:*Buchnera , a plant genus from the family Orobanchaceae*Buchnera , a genus of proteobacteria...

 aphidicola
APS Proteobacteria Gammaproteobacteria 640,681 564
Buchnera aphidicola B Proteobacteria Gammaproteobacteria 615,980 504
Buchnera aphidicola Sg Proteobacteria Gammaproteobacteria 641,454 545
Burkholderia cenocepacia
Burkholderia cenocepacia
Burkholderia cenocepacia is a species of Gram-negative bacteria that is common in the environment and may cause disease in plants. It is an opportunistic pathogen and human infections are common in patients with cystic fibrosis and chronic granulomatous disease, and are often fatal...

AU1054 Proteobacteria Betaproteobacteria 3,294,563 2,965 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,788,459 2,472 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 1,196,094 1,040 Unpublished
Burkholderia mallei
Burkholderia mallei
Burkholderia mallei is a gram-negative bipolar aerobic bacterium, a Burkholderia-genus human and animal pathogen causing Glanders; the Latin name of this disease gave name to the causative agent species...

ATCC23344 Proteobacteria Betaproteobacteria 3,510,148 2,996 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,325,379 2,029
Burkholderia pseudomallei
Burkholderia pseudomallei
Burkholderia pseudomallei is a Gram-negative, bipolar, aerobic, motile rod-shaped bacterium. It infects humans and animals and causes the disease melioidosis. It is also capable of infecting plants....

1710b Proteobacteria Betaproteobacteria 4,126,292 3,736 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 3,181,762 2,611 Unpublished
Burkholderia pseudomallei K96243 (chromosome I) Proteobacteria Betaproteobacteria 4,074,542 3,460
K96243 (chromosome II) Proteobacteria Betaproteobacteria 3,173,005 2,395
Burkholderia species 383 Proteobacteria Betaproteobacteria 3,694,126 3,334 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 3,587,082 3,174 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 1,395,069 1,209 Unpublished
Burkholderia thailandensis
Burkholderia thailandensis
Burkholderia thailandensis is a non-fermenting motile Gram-negative bacillus that occurs naturally in soil. It is closely related to Burkholderia pseudomallei, but unlike B. pseudomallei, it only rarely causes disease in humans or animals. The lethal inoculum is approximately 1000 times higher...

E264 Proteobacteria Betaproteobacteria 3,809,201 3,276
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,914,771 2,358
Burkholderia xenovorans
Burkholderia xenovorans
Burkholderia xenovorans is a species of Proteobacteria.-Genomics:The genome of Burkholderia xenovorans is one of the largest bacterial genomes completely sequenced to date...

LB400 Proteobacteria Betaproteobacteria 4,895,836 4,430 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 3,363,523 2,960 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 1,471,779 1,312 Unpublished
Campylobacter jejuni
Campylobacter jejuni
Campylobacter jejuni is a species of curved, helical-shaped, non-spore forming, Gram-negative, microaerophilic bacteria commonly found in animal feces. It is one of the most common causes of human gastroenteritis in the world. Food poisoning caused by Campylobacter species can be severely...

NCTC11168 Proteobacteria delta-epsilon 1,641,481 1,643
Campylobacter jejuni RM1221 Proteobacteria delta-epsilon 1,777,831 1,838
Carboxydothermus hydrogenoformans Z2901 Firmicutes Clostridia 2,401,520 2,620 Unpublished
Carsonella ruddii
Candidatus Carsonella ruddii
Candidatus Carsonella ruddii is an obligate endosymbiotic Gamma Proteobacterium; it has the smallest genome of any characterised bacteria....

PV Proteobacteria Gammaproteobacteria 159,662 182
Caulobacter crescentus
Caulobacter crescentus
Caulobacter crescentus is a Gram-negative, oligotrophic bacterium widely distributed in fresh water lakes and streams.Caulobacter is an important model organism for studying the regulation of the cell cycle, asymmetric cell division, and cellular differentiation. Caulobacter daughter cells have...

CB15 Proteobacteria Alphaproteobacteria 4,016,947 3,737
Chlamydia muridarum
Chlamydia muridarum
Chlamydia muridarum is an intracellular bacterial species that at one time belonged to Chlamydia trachomatis. However, C. trachomatis naturally only infects humans and C...

Nigg Chlamydiae/Verrucomicrobia Chlamydiae 1,072,950 904
Chlamydia trachomatis
Chlamydia trachomatis
Chlamydia trachomatis, an obligate intracellular human pathogen, is one of three bacterial species in the genus Chlamydia. C. trachomatis is a Gram-negative bacteria, therefore its cell wall components retain the counter-stain safranin and appear pink under a light microscope.The inclusion bodies...

AHAR13 Chlamydiae/Verrucomicrobia Chlamydiae 1,044,459 911
Chlamydia trachomatis DUW Chlamydiae/Verrucomicrobia Chlamydiae 1,042,519 894
Chlamydophila abortus
Chlamydophila abortus
Chlamydophila abortus is a species in Chlamydiae that causes abortion and fetal death in mammals, including humans. Chlamydophila abortus was previously classified as Chlamydia psittaci along with all Chlamydiae except Chlamydia trachomatis. This was based on a lack of evident glycogen production...

S26-3 Chlamydiae/Verrucomicrobia Chlamydiae 1,144,377 961
Chlamydophila caviae
Chlamydophila caviae
Chlamydophila caviae is a bacterium that can be recovered from the conjunctiva of Guinea pigs suffering from ocular inflammation and eye discharge. It is also possible to infect the genital tract of Guinea pigs with C. caviae and elicit a disease that is very similar to human Chlamydia trachomatis...

GPIC Chlamydiae
Chlamydiae
Chlamydiae is a bacterial phylum and class whose members are obligate intracellular pathogens. Many Chlamydiae coexist in an asymptomatic state within specific hosts, and it is widely believed that these hosts provide a natural reservoir for these species....

/Verrucomicrobia Chlamydiae
1,173,390 998
Chlamydophila felis
Chlamydophila felis
Chlamydophila felis is a bacterium endemic among house cats worldwide, primarily causing inflammation of feline conjunctiva, rhinitis and respiratory problems. C. felis can be recovered from the stomach and reproductive tract. Zoonotic infection of humans with C. felis has been reported...

FeC56 Chlamydiae/Verrucomicrobia Chlamydiae 1,166,239 1,005 Unpublished
Chlamydophila pneumoniae
Chlamydophila pneumoniae
Chlamydophila pneumoniae is a species of Chlamydophila, an obligate intracellular bacteria that infects humans and is a major cause of pneumonia....

AR39 Chlamydiae/Verrucomicrobia Chlamydiae 1,229,853 1,110
Chlamydophila pneumoniae CWL029 Chlamydiae/Verrucomicrobia Chlamydiae 1,230,230 1,052
Chlamydophila pneumoniae J138 Chlamydiae/Verrucomicrobia Chlamydiae 1,226,565 1,069
Chlamydophila pneumoniae TW183 Chlamydiae/Verrucomicrobia Chlamydiae 1,225,935 1,113 Unpublished
Chlorobium chlorochromatii CaD3 Bacteroidetes/Chlorobi Chlorobi 2,572,079 2,002 Unpublished
Chlorobium tepidum TLS Bacteroidetes/Chlorobi Chlorobi 2,154,946 2,255
Chromobacterium violaceum ATCC12472 Proteobacteria Betaproteobacteria 4,751,080 4,407
Chromohalobacter salexigens DSM3043 Proteobacteria Gammaproteobacteria 3,696,649 3,298 Unpublished
Clostridium acetobutylicum
Clostridium acetobutylicum
Clostridium acetobutylicum, ATCC 824, is included in the genus Clostridium, is a commercially valuable bacterium sometimes called the "Weizmann Organism", after Jewish-Russian born Chaim Weizmann, then senior lecturer at the University of Manchester, England, used them in 1916 as a bio-chemical...

ATCC824 Firmicutes Clostridia 3,940,880 3,672
Clostridium difficile
Clostridium difficile
Clostridium difficile , also known as "CDF/cdf", or "C...

QCD-32g58 Firmicutes Clostridia 3,840,681 Unpublished
Clostridium perfringens
Clostridium perfringens
Clostridium perfringens is a Gram-positive, rod-shaped, anaerobic, spore-forming bacterium of the genus Clostridium. C. perfringens is ever present in nature and can be found as a normal component of decaying vegetation, marine sediment, the intestinal tract of humans and other vertebrates,...

13 Firmicutes Clostridia 3,031,430 2,660
Clostridium tetani
Clostridium tetani
Clostridium tetani is a rod-shaped, anaerobic bacterium of the genus Clostridium. Like other Clostridium species, it is Gram-positive, and its appearance on a gram stain resembles tennis rackets or drumsticks. C. tetani is found as spores in soil or in the gastrointestinal tract of animals. C...

E88 Firmicutes Clostridia 2,799,251 2,373
Colwellia psychrerythraea 34H Proteobacteria Gammaproteobacteria 5,373,180 4,910 Unpublished
Corynebacterium diphtheriae
Corynebacterium diphtheriae
Corynebacterium diphtheriae is a pathogenic bacterium that causes diphtheria. It is also known as the Klebs-Löffler bacillus, because it was discovered in 1884 by German bacteriologists Edwin Klebs and Friedrich Löffler .-Classification:Four subspecies are recognized: C. diphtheriae mitis, C....

NCTC13129 Acidobacteria 2,488,635 2,320
Corynebacterium
Corynebacterium
Corynebacterium is a genus of Gram-positive rod-shaped bacteria. They are widely distributed in nature and are mostly innocuous. Some are useful in industrial settings such as C. glutamicum. Others can cause human disease. C...

 efficiens
YS314 Acidobacteria 3,147,090 2,942
Corynebacterium glutamicum ATCC13032 Acidobacteria 3,309,401 3,099 Unpublished
Unspecified Unspecified Acidobacteria 3,282,708 3,058
Corynebacterium jeikeium
Corynebacterium jeikeium
Corynebacterium jeikeium is a rod-shaped, catalase-positive, aerobic species of actinobacteria in the genus Corynebacterium. C. jeikeium is pathogenic, typically causing an opportunistic infection seen most frequently in bone marrow transplant patients.C. jeikeium is usually susceptible to...

K411 Acidobacteria 2,462,499 2,104
Coxiella burnetii RSA493 Proteobacteria Gammaproteobacteria 1,995,281 2,016
Cyanobacteria bacterium YellowstoneA Cyanobacteria Chroococcales 2,932,766 2,760
Cyanobacteria bacterium YellowstoneB Cyanobacteria Chroococcales 3,046,682 2,862
Cytophaga hutchinsonii ATCC33406 Bacteroidetes/Chlorobi Chlorobi 4,433,218 Unpublished
Dechloromonas aromatica RCB Proteobacteria Betaproteobacteria 4,501,104 4,171 Unpublished
Dehalococcoides etheno 195 Chloroflexi Dehalococcoidetes 1,469,720 1,580
Dehalococcoides species CBDB1 Chloroflexi Dehalococcoidetes 1,395,502 1,458
Deinococcus
Deinococcus
The Deinococcus is the one genus of three of the Deinococcales group from the Deinococcus-Thermus phylum highly resistant to environmental hazards.There are 47 species of Deinococcus described according to NCBI on 25 august 2011 :...

 geothermalis
DSM11300 Deinococcus-Thermus Deinococci 2,467,205 2,335 Unpublished
Deinococcus radiodurans
Deinococcus radiodurans
Deinococcus radiodurans is an extremophilic bacterium, one of the most radioresistant organisms known. It can survive cold, dehydration, vacuum, and acid, and is therefore known as a polyextremophile and has been listed as the world's toughest bacterium in The Guinness Book Of World Records.-Name...

R1 Deinococcus-Thermus Deinococci 2,648,638 2,579
Unspecified Unspecified Deinococcus-Thermus Deinococci 412,348 357
Desulfitobacterium hafniense Y51 Firmicutes Clostridia 5,727,534 5,060
Desulfotalea psychrophila LSv54 Proteobacteria delta-epsilon 3,523,383 3,118 Unpublished
Desulfovibrio desulfuricans G20 Proteobacteria delta-epsilon 3,730,232 3,775 Unpublished
Desulfovibrio vulgaris Hildenborough Proteobacteria delta-epsilon 3,570,858 3,379
Ehrlichia canis Jake Proteobacteria Alphaproteobacteria 1,315,030 925 Unpublished
Ehrlichia chaffeensis Arkansas Proteobacteria Alphaproteobacteria 1,176,248 1,105
Ehrlichia ruminantium Gardel Proteobacteria Alphaproteobacteria 1,499,920 950 Unpublished
Ehrlichia ruminantium Welgevonden Proteobacteria Alphaproteobacteria 1,512,977 958 Unpublished
Unspecified Unspecified Proteobacteria Alphaproteobacteria 1,516,355 920
Enterococcus faecalis V583 Firmicutes Bacilli 3,218,031 3,113
Erwinia carotovora SCRI1043 Proteobacteria Gammaproteobacteria 5,064,019 4,492 Unpublished
Erythrobacter litoralis HTCC2594 Proteobacteria Alphaproteobacteria 3,052,398 3,011 Unpublished
Escherichia coli
Escherichia coli
Escherichia coli is a Gram-negative, rod-shaped bacterium that is commonly found in the lower intestine of warm-blooded organisms . Most E. coli strains are harmless, but some serotypes can cause serious food poisoning in humans, and are occasionally responsible for product recalls...

536 Proteobacteria Gammaproteobacteria 4,938,920 4,685 Unpublished
Escherichia coli CFT073 Proteobacteria Gammaproteobacteria 5,231,428 5,379
Escherichia coli K-12 Proteobacteria Gammaproteobacteria 4,639,675 4,331
Unspecified Unspecified Proteobacteria Gammaproteobacteria 4,646,332 4,337
Escherichia coli O157:H7 Proteobacteria Gammaproteobacteria 5,528,445 5,349
Unspecified Unspecified Proteobacteria Gammaproteobacteria 5,498,450 5,361
Escherichia coli UTI89 Proteobacteria Gammaproteobacteria 5,065,741 5,066 Unpublished
Francisella tularensis LVS Proteobacteria Gammaproteobacteria 1,895,994 1,967 Unpublished
Francisella tularensis SCHUS4 Proteobacteria Gammaproteobacteria 1,892,819 1,804
Frankia species CcI3 Acidobacteria 5,433,628 4,499 Unpublished
Fusobacterium nucleatum ATCC25586 Fusobacteria Fusobacteria 2,174,500 2,067
Geobacillus kaustophilus HTA426 Firmicutes Bacilli 3,544,776 3,498
Geobacter metallireducens GS15 Proteobacteria delta-epsilon 3,997,420 3,519 Unpublished
Geobacter sulfurreducens PCA Proteobacteria delta-epsilon 3,814,139 3,447
Gloeobacter violaceus PCC7421 Cyanobacteria Gloeobacteria 4,659,019 4,430
Gluconobacter oxydans 621H Proteobacteria Alphaproteobacteria 2,702,173 2,432
Haemophilus ducreyi
Haemophilus ducreyi
Haemophilus ducreyi is a fastidious gram-negative coccobacillus causing the sexually transmitted disease chancroid, a major cause of genital ulceration in developing countries characterized by painful sores on the genitalia. Another early symptom is dark or light green shears in excrement...

3500HP Proteobacteria Gammaproteobacteria 1,698,955 1,717 Unpublished
Haemophilus influenzae
Haemophilus influenzae
Haemophilus influenzae, formerly called Pfeiffer's bacillus or Bacillus influenzae, Gram-negative, rod-shaped bacterium first described in 1892 by Richard Pfeiffer during an influenza pandemic. A member of the Pasteurellaceae family, it is generally aerobic, but can grow as a facultative anaerobe. H...

86-028NP Proteobacteria Gammaproteobacteria 1,913,428 1,792
Haemophilus influenzae Rd Proteobacteria Gammaproteobacteria 1,830,138 1,709
Hahella chejuensis KCTC2396 Proteobacteria Gammaproteobacteria 7,215,267 6,782
Helicobacter
Helicobacter
Helicobacter is a genus of Gram-negative bacteria possessing a characteristic helix shape. They were initially considered to be members of the Campylobacter genus, but since 1989 they have been grouped in their own genus...

 hepaticus
ATCC51449 Proteobacteria delta-epsilon 1,799,146 1,875
Helicobacter pylori
Helicobacter pylori
Helicobacter pylori , previously named Campylobacter pyloridis, is a Gram-negative, microaerophilic bacterium found in the stomach. It was identified in 1982 by Barry Marshall and Robin Warren, who found that it was present in patients with chronic gastritis and gastric ulcers, conditions that were...

26695 Proteobacteria delta-epsilon 1,667,867 1,566
Helicobacter pylori HPAG1 Proteobacteria delta-epsilon 1,596,366 1,536 Unpublished
Helicobacter pylori J99 Proteobacteria delta-epsilon 1,643,831 1,491
Idiomarina loihiensis L2TR Proteobacteria Gammaproteobacteria 2,839,318 2,628
Jannaschia species CCS1 Proteobacteria Alphaproteobacteria 4,317,977 4,212 Unpublished
Lactobacillus acidophilus
Lactobacillus acidophilus
Lactobacillus acidophilus is a species in the genus Lactobacillus. L. acidophilus is a homofermentative species, fermenting sugars into lactic acid, which grows readily at rather low pH values and has an optimum growth temperature of 37 °C . L...

NCFM Firmicutes Bacilli 1,993,564 1,864
Lactobacillus
Lactobacillus
Lactobacillus is a genus of Gram-positive facultative anaerobic or microaerophilic rod-shaped bacteria. They are a major part of the lactic acid bacteria group, named as such because most of its members convert lactose and other sugars to lactic acid. They are common and usually benign...

 delbrueckii
bulgaricus Firmicutes Bacilli 1,864,998 2,096 Unpublished
Lactobacillus johnsonii NCC533 Firmicutes Bacilli 1,992,676 1,821
Lactobacillus plantarum WCFS1 Firmicutes Bacilli 3,308,274 3,051
Lactobacillus sakei 23K Firmicutes Bacilli 1,884,661 1,885 Unpublished
Lactobacillus sakei sakei23K Firmicutes Bacilli 1,884,661 1,885 Unpublished
Lactobacillus salivarius UCC118 Firmicutes Bacilli 1,827,111 1,717 Unpublished
Lactococcus lactis IL1403 Firmicutes Bacilli 2,365,589 2,266
Lawsonia intracellularis PHEMN1-00 Proteobacteria delta-epsilon 1,719,014 1,344 Unpublished
Unspecified Unspecified Proteobacteria delta-epsilon 39,794 24 Unpublished
Unspecified Unspecified Proteobacteria delta-epsilon 194,553 104 Unpublished
Unspecified Unspecified Proteobacteria delta-epsilon 1,457,619 1,187 Unpublished
Legionella pneumophila
Legionella pneumophila
Legionella pneumophila is a thin, ærobic, pleomorphic, flagellated, non-spore forming, Gram-negative bacterium of the genus Legionella. L. pneumophila is the primary human pathogenic bacterium in this group and is the causative agent of legionellosis or Legionnaires' disease.-Characterization:L...

Lens Proteobacteria Gammaproteobacteria 3,345,687 2,947
Legionella pneumophila Paris Proteobacteria Gammaproteobacteria 3,503,610 3,082
Legionella pneumophila Philadelphia1 Proteobacteria Gammaproteobacteria 3,397,754 2,942 Unpublished
Leifsonia xyli
Leifsonia
Leifsonia xyli subsp. xyli is a small, fastidious, Gram-positive, coryneform bacterium that causes ratoon stunting disease, a major worldwide disease of sugarcane.-Classification:...

CTCB07 Acidobacteria 2,584,158 2,030 Unpublished
Leptospira
Leptospira
Leptospira is a genus of spirochaete bacteria, including a small number of pathogenic and saprophytic species...

 interrogans
56601 Spirochaetes 4,332,241 4,358
Unspecified Unspecified Spirochaetes 358,943 367
Leptospira interrogans FiocruzL1130 Spirochaetes 4,277,185 3,394
Unspecified Unspecified Spirochaetes 350,181 264
Listeria innocua Clip11262 Firmicutes Bacilli 3,011,208 2,981
Listeria monocyto EGD Firmicutes Bacilli 2,944,528 2,855
Listeria monocyto 4b Firmicutes Bacilli 2,905,187 2,821
Magnetospirillum
Magnetospirillum
Magnetospirillum is a Gram-negative, microaerophilic genus of magnetotactic bacterium, first isolated from pond water by the microbiologist R. P. Blakemore in 1975. It is characterized by a spirillar, or helical, morphology. It is also a motile bacterium owing to the presence of a polar flagellum...

 magneticum
AMB1 Proteobacteria Alphaproteobacteria 4,967,148 4,559
Mannheimia succiniciproducens MBEL55E Proteobacteria Gammaproteobacteria 2,314,078 2,384 Unpublished
Mesoplasma florum L1 Firmicutes Mollicutes 793,224 683 Unpublished
Mesorhizobium loti MAFF303099 Proteobacteria Alphaproteobacteria 7,036,071 6,752
Methylobacillus flagellatus KT Proteobacteria Betaproteobacteria 2,971,517 2,753 Unpublished
Methylococcus capsulatus
Methylococcus capsulatus
Methylococcus capsulatus is an obligately methanotrophic gram-negative, non-motile coccoid bacterium. M. capsulatus cells are encapsulated and tend to have a diplococcoid arrangement. In addition to methane, M. capsulatus is able to oxidize some organic hydrogen containing compounds such as...

Bath Proteobacteria Gammaproteobacteria 3,304,561 2,960
Moorella thermoacetica ATCC39073 Firmicutes Clostridia 2,628,784 2,465 Unpublished
Mycobacterium
Mycobacterium
Mycobacterium is a genus of Actinobacteria, given its own family, the Mycobacteriaceae. The genus includes pathogens known to cause serious diseases in mammals, including tuberculosis and leprosy...

 avium
k10 Acidobacteria 4,829,781 4,350
Mycobacterium bovis AF212297 Acidobacteria 4,345,492 3,953
Mycobacterium leprae TN Acidobacteria 3,268,203 2,720
Mycobacterium tuberculosis
Mycobacterium tuberculosis
Mycobacterium tuberculosis is a pathogenic bacterial species in the genus Mycobacterium and the causative agent of most cases of tuberculosis . First discovered in 1882 by Robert Koch, M...

CDC1551 Acidobacteria 4,403,837 4,189 Unpublished
Mycobacterium tuberculosis H37Rv Acidobacteria 4,411,532 3,999
Mycoplasma
Mycoplasma
Mycoplasma refers to a genus of bacteria that lack a cell wall. Without a cell wall, they are unaffected by many common antibiotics such as penicillin or other beta-lactam antibiotics that target cell wall synthesis. They can be parasitic or saprotrophic. Several species are pathogenic in humans,...

 capricolum
ATCC27343 Firmicutes Mollicutes 1,010,023 812 Unpublished
Mycoplasma gallisepticum
Mycoplasma gallisepticum
Mycoplasma gallisepticum is a bacterium belonging to the class Mollicutes and the family Mycoplasmataceae. It is the causative agent of chronic respiratory disease in chickens and infectious sinusitis in turkeys, chickens, game birds, pigeons, and passerine birds of all ages.-Transmission:MG is...

R Firmicutes Mollicutes 996,422 726
Mycoplasma genitalium
Mycoplasma genitalium
Mycoplasma genitalium is a small parasitic bacterium that lives on the ciliated epithelial cells of the primate genital and respiratory tracts. M. genitalium is the smallest known genome that can constitute a cell, and the second-smallest bacterium after the recently-discovered endosymbiont...

G37 Firmicutes Mollicutes 580,076 476
Mycoplasma hyopneumoniae
Mycoplasma hyopneumoniae
-Introduction:Mycoplasma hyopneumoniae is a species of bacteria known to cause the disease Porcine Enzootic Pneumonia, a highly contagious and chronic disease affecting pigs . As with other mollicutes, M...

232 Firmicutes Mollicutes 892,758 691
Mycoplasma hyopneumoniae 7448 Firmicutes Mollicutes 920,079 663
Mycoplasma hyopneumoniae J Firmicutes Mollicutes 897,405 665
Mycoplasma mobile 163K Firmicutes Mollicutes 777,079 635
Mycoplasma mycoides SC Firmicutes Mollicutes 1,211,703 1,016
Mycoplasma penetrans HF2 Firmicutes Mollicutes 1,358,633 1,037
Mycoplasma pneumoniae
Mycoplasma pneumoniae
Mycoplasma pneumoniae is a very small bacterium in the class Mollicutes.It causes the disease mycoplasma pneumonia, a form of atypical bacterial pneumonia, and is related to cold agglutinin disease.-Cell wall/Treatment:...

M129 Firmicutes Mollicutes 816,394 688
Mycoplasma pulmonis UAB Firmicutes Mollicutes 963,879 782
Mycoplasma synoviae
Mycoplasma synoviae
-Introduction:The bacteria M. synoviae is a member of the mycoplasma genus. It causes disease in the joints, bones and respiratory system of birds. It is found throughout the world and infection may be referred to as Infectious Synovitis, Avian Mycoplasmosis, Infectious Sinusitis and Mycoplasma...

53 Firmicutes Mollicutes 799,476 672
Myxococcus xanthus DK1622 Proteobacteria delta-epsilon 9,139,763 7,331 Unpublished
Neisseria gonorrhoeae
Neisseria gonorrhoeae
Neisseria gonorrhoeae, also known as gonococci , or gonococcus , is a species of Gram-negative coffee bean-shaped diplococci bacteria responsible for the sexually transmitted infection gonorrhea.N...

FA1090 Proteobacteria Betaproteobacteria 2,153,922 2,002 Unpublished
Neisseria meningitidis
Neisseria meningitidis
Neisseria meningitidis, often referred to as meningococcus, is a bacterium that can cause meningitis and other forms of meningococcal disease such as meningococcemia, a life threatening sepsis. N. meningitidis is a major cause of morbidity and mortality during childhood in industrialized countries...

A Proteobacteria Betaproteobacteria 2,184,406 2,121
Neisseria meningitidis B Proteobacteria Betaproteobacteria 2,272,360 2,063
Neorickettsia sennetsu Miyayama Proteobacteria Alphaproteobacteria 859,006 932
Nitrobacter
Nitrobacter
Nitrobacter is genus of mostly rod-shaped, gram-negative, and chemoautotrophic bacteria.Nitrobacter plays an important role in the nitrogen cycle by oxidizing nitrite into nitrate in soil...

 hamburgensis
X14 Proteobacteria Alphaproteobacteria 4,406,967 3,804 Unpublished
Nitrobacter winogradskyi Nb255 Proteobacteria Alphaproteobacteria 3,402,093 3,122 Unpublished
Nitrosococcus oceani ATCC19707 Proteobacteria Gammaproteobacteria 3,481,691 2,976 Unpublished
Nitrosomonas europaea Schmidt Proteobacteria Betaproteobacteria 2,812,094 2,574
Nitrosospira multiformis ATCC25196 Proteobacteria Betaproteobacteria 3,184,243 2,757 Unpublished
Nocardia farcinica IFM10152 Acidobacteria 6,021,225 5,683
Novosphingobium aromaticivorans DSM12444 Proteobacteria Alphaproteobacteria 3,561,584 3,324 Unpublished
Oceanobacillus iheyensis HTE831 Firmicutes Bacilli 3,630,528 3,496
Parachlamy diaspecies UWE25 Chlamydiae/Verrucomicrobia Chlamydiae 2,414,465 2,031
Pasteurella multocida Pm70 Proteobacteria Gammaproteobacteria 2,257,487 2,014
Pelagibacter ubique
Pelagibacter ubique
Pelagibacter, with the single species P. ubique, was isolated in 2002 and given a specific name, although it has not yet been validly published according to the bacteriological code. It is an abundant member of the SAR11 clade in the phylum Alphaproteobacteria...

HTCC1062 Proteobacteria Alphaproteobacteria 1,308,759 1,354
Pelobacter carbinolicus DSM2380 Proteobacteria delta-epsilon 3,665,893 3,119 Unpublished
Pelodictyon luteolum DSM273 Bacteroidetes/Chlorobi Chlorobi 2,364,842 2,083 Unpublished
Photobacterium profundum
Photobacterium profundum
Photobacterium profundum is a deep sea Gammaproteobacterium, belonging to the family Vibrionaceae and genus Photobacterium. Like other members of this genus, P. profundum is a marine organism and has two circular chromosomes. P...

SS9 Proteobacteria Gammaproteobacteria 4,085,304 3,416 Unpublished
Unspecified Unspecified Proteobacteria Gammaproteobacteria 2,237,943 1,997 Unpublished
Photorhabdus luminescens laumondiiTTO1 Proteobacteria Gammaproteobacteria 5,688,987 4,905 Unpublished
Phytoplas maasteris AYWB Firmicutes Mollicutes 706,569 671 Unpublished
Phytoplas maasteris OY Firmicutes Mollicutes 860,631 754
Polaromonas species JS666 Proteobacteria Betaproteobacteria 5,200,264 4,817 Unpublished
Porphyromonas gingivalis W83 Bacteroidetes/Chlorobi Bacteroidetes 2,343,476 1,909
Prochlorococcus marinus MED4 Cyanobacteria Prochlorales 1,657,990 1,716
Prochlorococcus marinus MIT9312 Cyanobacteria Prochlorales 1,709,204 1,809 Unpublished
Prochlorococcus marinus MIT9313 Cyanobacteria Prochlorales 2,410,873 2,273
Prochlorococcus marinus NATL2A Cyanobacteria Prochlorales 1,842,899 1,890 Unpublished
Prochlorococcus marinus SS120 Cyanobacteria Prochlorales 1,751,080 1,882
Propionibacterium acnes KPA171202 Acidobacteria 2,560,265 2,297 Unpublished
Pseudoalteromonas haloplanktis TAC125 Proteobacteria Gammaproteobacteria 3,214,944 2,941
Unspecified Unspecified Proteobacteria Gammaproteobacteria 635,328 546
Pseudomonas aeruginosa
Pseudomonas aeruginosa
Pseudomonas aeruginosa is a common bacterium that can cause disease in animals, including humans. It is found in soil, water, skin flora, and most man-made environments throughout the world. It thrives not only in normal atmospheres, but also in hypoxic atmospheres, and has, thus, colonized many...

PAO1 Proteobacteria Gammaproteobacteria 6,264,403 5,566
Pseudomonas
Pseudomonas
Pseudomonas is a genus of gammaproteobacteria, belonging to the family Pseudomonadaceae containing 191 validly described species.Recently, 16S rRNA sequence analysis has redefined the taxonomy of many bacterial species. As a result, the genus Pseudomonas includes strains formerly classified in the...

 entomophila
L48 Proteobacteria Gammaproteobacteria 5,888,780 5,168 Unpublished
Pseudomonas fluorescens Pf-5 Proteobacteria Gammaproteobacteria 7,074,893 6,137
Pseudomonas fluorescens PfO-1 Proteobacteria Gammaproteobacteria 6,438,405 5,736 Unpublished
Pseudomonas putida
Pseudomonas putida
Pseudomonas putida is a gram-negative rod-shaped saprotrophic soil bacterium. Based on 16S rRNA analysis, P. putida has been placed in the P. putida group, to which it lends its name....

KT2440 Proteobacteria Gammaproteobacteria 6,181,863 5,350
Pseudomonas syringae B728a Proteobacteria Gammaproteobacteria 6,093,698 5,136
Pseudomonas syringae
Pseudomonas syringae
Pseudomonas syringae is a rod shaped, Gram-negative bacterium with polar flagella. It is a plant pathogen which can infect a wide range of plant species, and exists as over 50 different pathovars, all of which are available to legitimate researches via international culture collections such as the...

DC3000 Proteobacteria Gammaproteobacteria 6,397,126 5,470
Pseudomonas syringae phaseolicola1448A Proteobacteria Gammaproteobacteria 5,928,787 4,983 Unpublished
Psychrobacter arcticum 273-4 Proteobacteria Gammaproteobacteria 2,650,701 2,147 Unpublished
Psychrobacter cryohalolentis K5 Proteobacteria Gammaproteobacteria 41,221 44 Unpublished
Unspecified Unspecified Proteobacteria Gammaproteobacteria 3,059,876 2,467 Unpublished
Ralstonia
Ralstonia
Ralstonia is a genus of proteobacteria, previously included in the genus Pseudomonas. It is named after the American bacteriologist E. Ralston.-Genomics:* *...

 eutropha
JMP134 Proteobacteria Betaproteobacteria 3,806,533 3,439 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,726,152 2,407 Unpublished
Ralstonia metallidurans CH34 Proteobacteria Betaproteobacteria 3,928,089 3,601 Unpublished
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,580,084 2,313 Unpublished
Ralstonia solanacearum GMI1000 Proteobacteria Betaproteobacteria 3,716,413 3,441
Unspecified Unspecified Proteobacteria Betaproteobacteria 2,094,509 1,679
Rhizobium
Rhizobium
Rhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Rhizobium forms an endosymbiotic nitrogen fixing association with roots of legumes and Parasponia....

 etli
CFN42 Proteobacteria Alphaproteobacteria 4,381,608 4,067
Rhizobium leguminosarum viciae3841 Proteobacteria Alphaproteobacteria 7,751,309 4,746 Unpublished
Rhodobacter sphaeroides 2.4.1 Proteobacteria Alphaproteobacteria 3,188,609 3,022 Unpublished
Unspecified Unspecified Proteobacteria Alphaproteobacteria 943,016 835 Unpublished
Rhodoferax ferrireducens DSM15236 Proteobacteria Betaproteobacteria 4,712,337 4,170 Unpublished
Rhodopirellula baltica strain1 Planctomycetes Planctomycetacia 7,145,576 7,325 Unpublished
Rhodopseudomonas palustris BisB18 Proteobacteria Alphaproteobacteria 5,513,844 4,886 Unpublished
Rhodopseudomonas palustris BisB5 Proteobacteria Alphaproteobacteria 4,892,717 4,397 Unpublished
Rhodopseudomonas palustris
Rhodopseudomonas palustris
Rhodopseudomonas palustris is a gram-negative purple non-sulfur bacteria, notable for its ability to switch between four different modes of metabolism....

CGA009 Proteobacteria Alphaproteobacteria 5,459,213 4,833
Rhodopseudomonas palustris HaA2 Proteobacteria Alphaproteobacteria 5,331,656 4,683 Unpublished
Rhodospirillum rubrum ATCC11170 Proteobacteria Alphaproteobacteria 4,352,825 3,791 Unpublished
Rickettsia bellii RML369-C Proteobacteria Alphaproteobacteria 1,522,076 1,429 Unpublished
Rickettsia conorii
Rickettsia conorii
Rickettsia conorii is a unicellular, gram-negative, obligate intracellular bacterium of the genus Rickettsia that causes human disease called Boutonneuse fever, Mediterranean spotted fever, Israeli tick typhus, Astrakhan spotted fever, Kenya tick typhus, Indian tick typhus, or other names that...

Malish7 Proteobacteria Alphaproteobacteria 1,268,755 1,374
Rickettsia felis
Rickettsia felis
Rickettsia felis or cat-flea typhus is a species of Rickettsia that causes flea-borne spotted fever in cats. The bacteria can also infect humans and cause illness. Fleas are the vector carriers of the bacteria and it has been found in cat flea populations of North and South America, Southern...

URRWXCal2 Proteobacteria Alphaproteobacteria 1,485,148 1,400
Rickettsia prowazekii
Rickettsia prowazekii
Rickettsia prowazekii is a species of gram negative, Alpha Proteobacteria, obligate intracellular parasitic, aerobic bacteria that is the etiologic agent of epidemic typhus, transmitted in the feces of lice. In North America, the main reservoir for R. prowazekii is the flying squirrel. R...

Madrid-E Proteobacteria Alphaproteobacteria 1,111,523 834
Rickettsia typhi
Rickettsia typhi
Rickettsia typhi is a species of the genus Rickettsia.It is the causative agent of Murine typhus.The genome is similar to that of Rickettsia prowazekii.-References:...

Wilmington Proteobacteria Alphaproteobacteria 1,111,496 838
Rubrobacter xylanophilus DSM9941 Acidobacteria 3,225,748 3,140 Unpublished
Saccharophagus degradans Feb-40 Proteobacteria Gammaproteobacteria 5,057,531 4,008 Unpublished
Salinibacter ruber DSM13855 Bacteroidetes/Chlorobi Bacteroidetes 3,551,823 2,801
Salmonella enterica
Salmonella enterica
Salmonella enterica is a rod-shaped flagellated, facultative anaerobic, Gram-negative bacterium, and a member of the genus Salmonella.- Epidemiology :...

ATCC9150 Proteobacteria Gammaproteobacteria 4,585,229 4,093
Salmonella
Salmonella
Salmonella is a genus of rod-shaped, Gram-negative, non-spore-forming, predominantly motile enterobacteria with diameters around 0.7 to 1.5 µm, lengths from 2 to 5 µm, and flagella which grade in all directions . They are chemoorganotrophs, obtaining their energy from oxidation and reduction...

 enterica
SCB67 Proteobacteria Gammaproteobacteria 4,755,700 4,445
Salmonella enterica Ty2 Proteobacteria Gammaproteobacteria 4,791,961 4,323
Salmonella enterica typhiCT18 Proteobacteria Gammaproteobacteria 4,809,037 4,600
Salmonella typhimurium LT2 Proteobacteria Gammaproteobacteria 4,857,432 4,452
Shewanella denitrificans OS217 Proteobacteria Gammaproteobacteria 4,545,906 3,754 Unpublished
Shewanella oneidensis MR1 Proteobacteria Gammaproteobacteria 4,969,803 4,630
Shigella
Shigella
Shigella is a genus of Gram-negative, nonspore forming, non-motile, rod-shaped bacteria closely related to Escherichia coli and Salmonella. The causative agent of human shigellosis, Shigella causes disease in primates, but not in other mammals. It is only naturally found in humans and apes. During...

 boydii
Sb227 Proteobacteria Gammaproteobacteria 4,519,823 4,142
Shigella dysenteriae Sd197 Proteobacteria Gammaproteobacteria 4,369,232 4,277
Shigella flexneri 2457T Proteobacteria Gammaproteobacteria 4,599,354 4,073
Shigella flexneri 2a301 Proteobacteria Gammaproteobacteria 4,607,203 4,436
Shigella sonnei Ss046 Proteobacteria Gammaproteobacteria 4,825,265 4,224
Silicibacter pomeroyi DSS3 Proteobacteria Alphaproteobacteria 4,109,442 3,810
Silicibacter species TM1040 Proteobacteria Alphaproteobacteria 3,200,938 3,030 Unpublished
Sinorhizobium medicae WSM419 Alphaproteobacteria
Alphaproteobacteria
Alphaproteobacteria is a class of Proteobacteria. Like all Proteobacteria, they are Gram-negative.-Characteristics:The Alphaproteobacteria comprise most phototrophic genera, but also several genera metabolising C1-compounds , symbionts of plants and animals, and a group of pathogens, the...

3,781,904 3,635
Sinorhizobium meliloti
Sinorhizobium meliloti
Sinorhizobium meliloti is a Gram-negative nitrogen-fixing bacterium . It forms a symbiotic relationship with legumes from the genera Medicago, Melilotus and Trigonella, including the model legume Medicago truncatula. This symbiosis results in a new plant organ termed a root nodule. The S...

Rm1021 Alphaproteobacteria
Alphaproteobacteria
Alphaproteobacteria is a class of Proteobacteria. Like all Proteobacteria, they are Gram-negative.-Characteristics:The Alphaproteobacteria comprise most phototrophic genera, but also several genera metabolising C1-compounds , symbionts of plants and animals, and a group of pathogens, the...

3,654,135 3,341
Sodalis glossinidius morsitans Proteobacteria Gammaproteobacteria 4,171,146 2,432
Sphingopyxis alaskensis RB2256 Proteobacteria Alphaproteobacteria 3,345,170 3,165 Unpublished
Staphylococcus aureus
Staphylococcus aureus
Staphylococcus aureus is a facultative anaerobic Gram-positive coccal bacterium. It is frequently found as part of the normal skin flora on the skin and nasal passages. It is estimated that 20% of the human population are long-term carriers of S. aureus. S. aureus is the most common species of...

COL Firmicutes Bacilli 2,809,422 2,673
Staphylococcus
Staphylococcus
Staphylococcus is a genus of Gram-positive bacteria. Under the microscope they appear round , and form in grape-like clusters....

 aureus
MRSA252 Firmicutes Bacilli 2,902,619 2,744
Staphylococcus aureus MSSA476 Firmicutes Bacilli 2,799,802 2,619
Staphylococcus aureus Mu50 Firmicutes Bacilli 2,878,529 2,699
Staphylococcus aureus MW2 Firmicutes Bacilli 2,820,462 2,632
Staphylococcus aureus N315 Firmicutes Bacilli 2,814,816 2,593
Staphylococcus aureus NCTC8325 Firmicutes Bacilli 2,821,361 2,892 Unpublished
Staphylococcus aureus RF122 Firmicutes Bacilli 2,742,531 2,589 Unpublished
Staphylococcus aureus USA300 Firmicutes Bacilli 2,872,769 2,560
Staphylococcus epidermidis ATCC12228 Firmicutes Bacilli 2,499,279 2,419 Unpublished
Staphylococcus epidermidis RP62A Firmicutes Bacilli 2,616,530 2,494
Staphylococcus haemolyticus JCSC1435 Firmicutes Bacilli 2,685,015 2,678
Staphylococcus saprophyticus saprophyticus Firmicutes Bacilli 2,516,575 2,446
Streptococcus agalactiae
Streptococcus agalactiae
Streptococcus agalactiae is a beta-hemolytic Gram-positive streptococcus.- Identification :The CAMP test is an important test for identification...

A909 Firmicutes Bacilli 2,127,839 1,996
Streptococcus agalactiae NEM316 Firmicutes Bacilli 2,211,485 2,134
Streptococcus agalactiae 2603 V/R Firmicutes Bacilli 2,160,267 2,124
Streptococcus mutans UAB159 Firmicutes Bacilli 2,030,921 1,960
Streptococcus pneumoniae
Streptococcus pneumoniae
Streptococcus pneumoniae, or pneumococcus, is Gram-positive, alpha-hemolytic, aerotolerant anaerobic member of the genus Streptococcus. A significant human pathogenic bacterium, S...

R6 Firmicutes Bacilli 2,038,615 2,043
Streptococcus pneumoniae TIGR4 Firmicutes Bacilli 2,160,842 2,125
Streptococcus pyogenes
Streptococcus pyogenes
Streptococcus pyogenes is a spherical, Gram-positive bacterium that is the cause of group A streptococcal infections. S. pyogenes displays streptococcal group A antigen on its cell wall. S...

M5Manfredo Firmicutes Bacilli 1,841,271 Unpublished
Streptococcus pyogenes MGAS10270 Firmicutes Bacilli 1,928,252 1,987
Streptococcus pyogenes MGAS10394 Firmicutes Bacilli 1,899,877 1,886
Streptococcus pyogenes MGAS10750 Firmicutes Bacilli 1,937,111 1,979
Streptococcus pyogenes MGAS2096 Firmicutes Bacilli 1,860,355 1,898
Streptococcus pyogenes MGAS315 Firmicutes Bacilli 1,900,521 1,865
Streptococcus pyogenes MGAS5005 Firmicutes Bacilli 1,838,554 1,865
Streptococcus pyogenes MGAS6180 Firmicutes Bacilli 1,897,573 1,894
Streptococcus pyogenes MGAS8232 Firmicutes Bacilli 1,895,017 1,845
Streptococcus pyogenes MGAS9429 Firmicutes Bacilli 1,836,467 1,877
Streptococcus pyogenes SF370 Firmicutes Bacilli 1,852,441 1,696
Streptococcus pyogenes SSI1 Firmicutes Bacilli 1,894,275 1,861
Streptococcus thermophilus CNRZ1066 Firmicutes Bacilli 1,796,226 1,915
Streptococcus thermophilus LMG18311 Firmicutes Bacilli 1,796,846 1,889
Streptomyces avermitilis MA4680 Acidobacteria 9,025,608 7,577
Streptomyces coelicolor A3 Acidobacteria 8,667,507 7,825
Symbiobacterium thermophilum Strain Acidobacteria 3,566,135 3,337
Synechococcus
Synechococcus
Synechococcus is a unicellular cyanobacterium that is very widespread in the marine environment. Its size varies from 0.8 µm to 1.5 µm...

 elongatus
PCC6301 Cyanobacteria Chroococcales 2,696,255 2,525 Unpublished
Synechococcus elongatus PCC7942 Cyanobacteria Chroococcales 2,695,903 2,611 Unpublished
Synechococcus sp WH8102 Cyanobacteria Chroococcales 2,434,428 2,526
Synechococcus species CC9605 Cyanobacteria Chroococcales 2,510,659 2,638 Unpublished
Synechococcus species CC9902 Cyanobacteria Chroococcales 2,234,828 2,304 Unpublished
Synechocystis species PCC6803 Cyanobacteria Chroococcales 3,573,470 3,167
Syntrophus aciditrophicus SB Proteobacteria delta-epsilon 3,179,300 3,168 Unpublished
Thermoanaerobacter tengcongensis MB4T Firmicutes Clostridia 2,689,445 2,588 Unpublished
Thermobifida fusca YX Acidobacteria 3,642,249 3,110 Unpublished
Thermosynechococcus elongatus bp1 Cyanobacteria Chroococcales 2,593,857 2,475 Unpublished
Thermotoga maritima MSB8 Thermotogae
Thermotogae
Thermotogae is a phylum of the domain "Bacteria". This phylum comprises merely the class "Thermotogae", with the order "Thermotogales" and the family "Thermotogaceae"....

1,860,725 1,846
Thermus thermophilus HB27 Deinococcus-Thermus Deinococci 1,894,877 1,982
Thermus thermophilus HB8 Deinococcus-Thermus Deinococci 1,849,742 1,973 Unpublished
Thiobacillus denitrificans ATCC25259 Proteobacteria Betaproteobacteria 2,909,809 2,827 Unpublished
Thiomicrospira crunogena XCL2 Proteobacteria Gammaproteobacteria 2,427,734 2,192 Unpublished
Thiomicrospira denitrificans ATCC33889 Proteobacteria delta-epsilon 2,201,561 2,097 Unpublished
Treponema denticola ATCC35405 Spirochaetes 2,843,201 2,767
Treponema pallidum Nichols Spirochaetes 1,138,011 1,031
Tropheryma whippelii TW0827 Acidobacteria 925,938 784 Unpublished
Tropheryma whippelii Twist Acidobacteria 927,303 808
Ureaplasma urealyticum serovar3 Firmicutes Mollicutes 751,719 611
Vibrio cholerae
Vibrio cholerae
Vibrio cholerae is a Gram-negative, comma-shaped bacterium. Some strains of V. cholerae cause the disease cholera. V. cholerae is facultatively anaerobic and has a flagella at one cell pole. V...

N16961 (chromosome I) Proteobacteria Gammaproteobacteria 2,961,149 2,736
N16961 (chromosome II) Proteobacteria Gammaproteobacteria 1,072,315 1,092
Vibrio
Vibrio
Vibrio is a genus of Gram-negative bacteria possessing a curved rod shape, several species of which can cause foodborne infection, usually associated with eating undercooked seafood. Typically found in saltwater, Vibrio are facultative anaerobes that test positive for oxidase and do not form...

 fischeri
ES114 (chromosome I) Proteobacteria Gammaproteobacteria 2,906,179 2,575
ES114 (chromosome II) Proteobacteria Gammaproteobacteria 1,332,022 1,172
Vibrio parahaemolyticus
Vibrio parahaemolyticus
Vibrio parahaemolyticus is a curved, rod-shaped, Gram-negative bacterium found in brackish saltwater, which, when ingested, causes gastrointestinal illness in humans. V. parahaemolyticus is oxidase positive, facultatively aerobic, and does not form spores...

RIMD2210633 (chromosome I) Proteobacteria Gammaproteobacteria 3,288,558 3,080
RIMD2210633 (chromosome II) Proteobacteria Gammaproteobacteria 1,877,212 1,752
Vibrio vulnificus
Vibrio vulnificus
Vibrio vulnificus is a species of Gram-negative, motile, curved, rod-shaped bacteria of the Vibrio Genus. It was first reported by Hollis et al. in 1976. It was subsequently given the name Beneckea vulnifica by Reichelt et al. in 1976 , and finally Vibrio vulnificus by Farmer in 1979...

CMCP6 (chromosome I) Proteobacteria Gammaproteobacteria 3,281,944 2,973
CMCP6 (chromosome II) Proteobacteria Gammaproteobacteria 1,844,853 1,565
Vibrio vulnificus YJ016 (chromosome I) Proteobacteria Gammaproteobacteria 3,354,505 3,262
YJ016 (chromosome II) Proteobacteria Gammaproteobacteria 1,857,073 1,697
Wigglesworthia glossinidia Strain Proteobacteria Gammaproteobacteria 697,724 611
Wolbachia
Wolbachia
Wolbachia is a genus of bacteria which infects arthropod species, including a high proportion of insects , as well as some nematodes. It is one of the world's most common parasitic microbes and is possibly the most common reproductive parasite in the biosphere...

 endosymbiont
TRS Proteobacteria Alphaproteobacteria 1,080,084 805
Wolbachia pipientis wMel Proteobacteria Alphaproteobacteria 1,267,782 1,195
Wolinella succino DSMZ1740 Proteobacteria delta-epsilon 2,110,355 2,044
Xanthomonas axonopodis citri306 Proteobacteria Gammaproteobacteria 5,175,554 4,312
Xanthomonas campestris
Xanthomonas campestris
Xanthomonas campestris is a bacterial species that causes a variety of plant diseases. Available from the NCPPB,and other international Culture collections such as ICMP, ATCC, and LMG in a purified form, it is used in the commercial production of a high-molecular-weight polysaccharide - xanthan...

8004 Proteobacteria Gammaproteobacteria 5,148,708 4,273
Xanthomonas campestris 8510 Proteobacteria Gammaproteobacteria 5,178,466 4,487
Xanthomonas campestris ATCC33913 Proteobacteria Gammaproteobacteria 5,076,188 4,181
Xanthomonas oryzae
Xanthomonas oryzae
Xanthomonas oryzae is a species of proteobacteria. The major host of the bacteria is rice .The species contains two pathovars which are non-European: Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv...

KACC10331 Proteobacteria Gammaproteobacteria 4,941,439 4,637
Xanthomonas oryzae MAFF311018 Proteobacteria Gammaproteobacteria 4,940,217 4,372 Unpublished
Xylella fastidiosa 9a5c Proteobacteria Gammaproteobacteria 2,679,306 2,766
Xylella fastidiosa Temecula1 Proteobacteria Gammaproteobacteria 2,519,802 2,034
Yersinia pestis
Yersinia pestis
Yersinia pestis is a Gram-negative rod-shaped bacterium. It is a facultative anaerobe that can infect humans and other animals....

Antiqua Proteobacteria Gammaproteobacteria 4,702,289 4,167
Yersinia pestis CO-92BiovarOrientalis Proteobacteria Gammaproteobacteria 4,653,728 4,008
Yersinia pestis KIM Proteobacteria Gammaproteobacteria 4,600,755 4,090
Yersinia pestis Mediaevalis Proteobacteria Gammaproteobacteria 4,595,065 3,895
Yersinia pseudotuberculosis IP32953 Proteobacteria Gammaproteobacteria 4,744,671 3,974
Zymomonas mobilis ZM4 Proteobacteria Alphaproteobacteria 2,056,416 1,998

See also

  • Genome project
    Genome project
    Genome projects are scientific endeavours that ultimately aim to determine the complete genome sequence of an organism and to annotate protein-coding genes and other important genome-encoded features...

  • Human microbiome project
    Human microbiome project
    The Human Microbiome Project is a United States National Institutes of Health initiative with the goal of identifying and characterizing the microorganisms which are found in association with both healthy and diseased humans . Launched in 2008, it is a five-year project, best characterized as a...

  • List of sequenced eukaryotic genomes
  • List of sequenced archeal genomes
  • List of sequenced plastomes

External links

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